Spitzer Documentation & Tools
Mosaic Input Parameters
Parameter names in the command line version Parameter names in the GUI version
Switch on/off (1/0) module Module name in GUI Flow (on/off)
compute_uncertainties_internally S/N estimator
have_uncertainties N/A (assumed to be 1 if uncertainty images are given in Sigma List File)
run_fiducial_image_frame Fiducial Image Frame
run_mosaic_geom Mosaic Geom
run_medfilter Med Filter
run_detect_radhit Detect Radhit
run_mosaic_interp Mosaic Interpolate
run_detect_outlier Detect
run_mosaic_proj Mosaic Projection
run_mosaic_covg Mosaic Coverage
run_mosaic_dual_outlier Mosaic Dual Outlier
run_level Level
run_mosaic_outlier Mosaic Outlier
run_mosaic_box_outlier Mosaic Box Outlier
run_mosaic_rmask Mosaic Rmask
run_mosaic_reinterp Mosaic Reinterpolate
run_fix_coverage Fix Coverage
run_mosaic_coadder Mosaic CoAdder
run_mosaic_combiner Mosaic Combiner
run_mosaic_medfilter Mosaic Med Filter
create_rmask_mosaic Create RMask Mosaic
make_array_corr_files Make Array Correction Files
make_array_corr_mosaic Make Array Correction Mosaic
overwrite_dmask N/A**
Initial Setup
IMAGE_STACK_FILE_NAME Image Stack File
OUTPUT_DIR Output Directory
Optional Input & Mask Files (within Initial Setup)
SIGMALIST_FILE_NAME Sigma List File
DCE_STATUS_MASK_LIST DCE Status Mask List
DCE_Status_Mask_Fatal_BitPattern Fatal Mask Bit Pattern
RMASK_LIST Rmask List File
RMask_Fatal_BitPattern Fatal Mask Bit Pattern
PMASK_FILE_NAME Pmask FITS File
PMask_Fatal_BitPattern Fatal Mask Bit Pattern
FIF_FILE_NAME FIF file
Mosaic Settings
N/A (MOSAIC_PIXEL_RATIO overrides MOSAIC_PIXEL_SIZE) Pixel by Size
N/A (MOSAIC_PIXEL_RATIO overrides MOSAIC_PIXEL_SIZE) Pixel by Ratio
MOSAIC_PIXEL_SIZE_X Pixel Size X (deg)
MOSAIC_PIXEL_SIZE_Y Pixel Size Y (deg)
MOSAIC_PIXEL_RATIO_Y Pixel Ratio Y
MOSAIC_PIXEL_RATIO_X Pixel Ratio X
ARRAY_CORR_IMAGE Array Correction Frame
ARRAY_PIXAREA_IMAGE PixArea Frame
delete_intermediate_files_array_corr Delete Array Correction Intermediate Files
MOVING_OBJECT_MOSAIC Moving Object Mosaic
delete_intermediate_files Delete Intermediate Files
USE_REFINED_POINTING Use Refined Pointing
run_absolute_minimum_mosaic Create Absolute Minimum Mosaic
SNESTIMATORIN S/N estimator
Gain Gain in e-/image unit
Read_Noise Read Noise in e-
Confusion_Sigma Confusion Sigma in e-
SIGMA_DIR*** S/N estimator output subdirectory
FIDUCIALIMAGEFRAMEIN Fiducial Image Frame
Edge_Padding Edge Padding
Projection_Type Projection
Coordinate_System Coordinate System
CROTA2 (= A) Use average input orientation
CROTA2 CROTA2
MOSAICGEOM Mosaic Geom (no parameters)
MEDFILTER Med Filter
Window_X Window X
Window_Y Window Y
N_Outliers_Per_Window Outliers / Window
Sbkg_Filt_Size_for_Med SExtractor background filter size
Use_Sbkg_for_Med Use SExtractor background estimation
MEDFILTER_DIR*** Med Filter output subdirectory
DETECT_RADHIT Detect Radhit
Segmentation_Threshold Segmentation Threshold
Detection_Max_Area Detection Max Area
Radhit_Threshold Radhit Threshold
DMASK_DIR*** Detect Radhit DMASK output subdirectory
MOSAICINTIN Mosaic Interpolate
INTERP_METHOD Interp Method
FINERES Fine Res
DRIZ_FAC Drizzle Factor
GRID_RATIO Grid Ratio
ALPHA Alpha
INTERP_DIR*** Mosaic Interpolate output sudirectory
Detect Detect
Detection_Max_Area Detection Max Area
Detection_Min_Area Detection Min Area
Detection_Threshold Detection Threshold
Threshold_Type Threshold Type
DETECT_DIR*** Detect output subdirectory
MOSAICPROJIN Mosaic Projection (no parameters)
MOSAICCOVGIN Mosaic Coverage
TILEMAX_X Tile Max X
TILEMAX_Y Tile Max Y
MOSAICDUALOUTLIERIN Mosaic Dual Outlier
MAX_OUTL_IMAGE Max Outlier Image
MAX_OUTL_FRAC Max Outlier Fraction
TILE_XSIZ Tile X Size
TILE_YSIZ Tile Y Size
DUAL_OUTLIER_DIR*** Dual Outlier output subdirectory
LEVEL LEVEL
Threshold_Ratio Threshold Ratio
MOSAICOUTLIERIN Mosaic Outlier
BOTTOM_THRESHOLD Bottom Threshold
TOP_THRESHOLD Top Threshold
MIN_PIX_NUM Min Pix Number
TILE_XSIZ Tile X Size
TILE_YSIZ Tile Y Size
THRESH_OPTION N/A**
OUTLIER_DIR*** Mosaic OutLier output subdirectory
MOSAICBOXOUTLIERIN Mosaic Box Outlier
BOX_X Box Size-X direction
BOX_Y Box Size-Y direction
BOX_MEDIAN_BIAS Box Median Bias
TILE_XSIZ Tile X Size
TILE_YSIZ Tile Y Size
BOX_OUTLIER_DIR*** Box Outlier output subdirectory
MOSAICRMASKIN Mosaic R Mask
RM_THRESH RM Thresh
BOTTOM_THRESHOLD Bottom Threshold
TOP_THRESHOLD Top Threshold
MIN_COVERAGE Min Coverage
MAX_COVERAGE Max Coverage
REFINE_OUTLIER Refine Outlier
REFINE_OUTLIER_THRESH Refine Outlier Threshold
BOX_BOTTOM_THRESHOLD Box Bottom Threshold
BOX_TOP_THRESHOLD Box Top Threshold
BOX_MIN_COVERAGE Box Min Coverage
RMASK_DIR*** Mosaic Rmask output subdirectory
USE_OUTLIER_FOR_RMASK Use Outlier for Rmask
USE_BOX_OUTLIER_FOR_RMASK Use Dual Outlier for Rmask
USE_DUAL_OUTLIER_FOR_RMASK Use Box Outlier for Rmask
MOSAICREINTIN Mosaic Reinterpolate
REINTERP_DIR*** Mosaic Reinterpolate output subdirectory
FIX_COVERAGE FIX COVERAGE
Min_Single_Coverage Min Single Coverage
Min_Block_Coverage Min Block Coverage
MOSAICCOADDIN Mosaic CoAdder
TILEMAX_X Tile Max X
TILEMAX_Y Tile Max Y
INT_TIME_KWD Fits Integration Time Keyword
USE_INT_TIME_KWD Integration Time Weighted Coadd
COADDER_DIR*** Mosaic Co-Adder output subdirectory
keep_coadded_tiles Keep coadded Tiles
sigma_weighted_coadd Sigma Weighted Coadd
create_unc_mosaic Create UNC Mosaic
create_std_mosaic Create Standard Deviation Mosaic
create_outlier_mosaic Create Outlier Mosaic
create_dual_outlier_mosaic Create Dual Outlier Mosaic
run_median_mosaic N/A
MOSAICCOMBINER Mosaic Combiner
COMBINER_DIR*** Mosaic Combiner output subdirectory
MOSAIC_MEDFILTER Mosaic Med Filter
Window_X Window X
Window_Y Window Y
N_Outliers_Per_Window Outliers / Window
Sbkg_Filt_Size_for_Med SExtractor background filter size
Use_Sbkg_for_Med Use SExtractor background estimation
CREATEMASKMOSAIC Create RMask Mosaic
RMASK_MOSAIC_DIR*** Rmask Mosaic output subdirectory
MAKEARRAYCORRFILES Make Array Correction Files (no parameters)
MAKEARRAYCORRMOSAIC Make Array Correction Mosaic

Note -- (1) All bold-faced names are the modules or the names of parameter blocks in the GUI flow.
Note -- (2) Initial Setup has two sub-settings dialogs: one is Optional Input & Mask Files and the second one is General Otpions.
Note -- (3) N/A** means that overwrite_dmask parameter is implicitly set in the GUI flow.
*** -- set this parameter near the top of the namelist, not in the parameter block for the module.